Thesis
  • • Garcia M, Biomarkers discovery in breast cancer by Interactome-Transcriptome Integration, 2013/12/20.
Articles
  • • Liu T, Zhao J, Ibarra C, Garcia U. M, Uhlén P, Nistér M, Glycosylation Controls Sodium-Calcium Exchanger 3 Sub-Cellular Localization During Cell Cycle, European Journal of Cell Biology (2018) 97 (3): 190-203.
  • • Bonacci T, Audebert S, Camoin L, Baudelet E, Bidaut G, Garcia M, Witzel II, Perkins ND, Borg JP, Iovanna JL, Soubeyran P, Identification of new mechanisms of cellular response to chemotherapy by tracking changes in post-translational modifications by ubiquitin and ubiquitin-like proteins, Journal of Proteome Research (2014) 13 (5): 2478–2494.
  • • Garcia M, Millat-Carus R, Bertucci F, Finetti P, Birnbaum D, Bidaut G, Interactome-transcriptome integration for predicting distant metastasis in breast cancer, Bioinformatics (2012) 28 (5): 672-678.
Preprints
  • • Garcia M, Juhos S, Larsson M, Olason PI, Martin M, Eisfeldt J, DiLorenzo S, Sandgren J, Diaz de Ståhl T, Wirta V, Nistér M, Nystedt B, Käller M, Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants, bioRxiv 316976.
Chapters
  • • Garcia M, Millat-Carus R, Bertucci F, Finetti P, Guille A, Adelaïde J, Bekhouche I, Sabatier R, Chaffanet M, Birnbaum D, Bidaut G, CNV-Interactome-Transcriptome Integration to detect driver genes in cancerology in Microarray Image and Data Analysis: Theory and Practice, CRC Press (2014) 12: 331-338.
  • • Garcia M, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Detection of driver protein complexes in breast cancer metastasis by large scale transcriptome-interactome integration, Methods in Molecular Biology (2014) 1101: 67-85.
  • • Garcia M, Stahl O, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Linking Interactome to Disease: A Network-Based Analysis of Metastatic Relapse in Breast Cancer in Bioinformatics: Concepts, Methodologies, Tools, and Applications. IGI Global, (2013): 151-172.
  • • Garcia M, Stahl O, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Linking Interactome to Disease: A Network-Based Analysis of Metastatic Relapse in Breast Cancer in Handbook of Research on Computational and Systems Biology: Interdisciplinary Applications, IGI Global (2011): 406-427.
Talks
  • • Garcia M Sarek, A portable workflow for WGS/WES analysis of germline and somatic mutations, Stockholm, Sweden, 2018/10. FoUU-day for clinical pathology-cytology
  • • Garcia M Sarek, a portable workflow for WGS analysis of germline and somatic mutations, Marseille, France, 2018/07. JOBIM 2018
  • • Garcia M Sarek and nf-core for Reproducibility, Basel, Switzerland, 2018/03. SPHN Workflow Interoperability Workshop
  • • Garcia M Biomarkers Discovery in Breast Cancer by Interactome-Transcriptome Integration, Vienna, Austria, 2011/04. MASAMB XXI
  • • Garcia M Biomarkers Discovery in Breast Cancer by Interactome-Transcriptome Integration, Cambridge, UK, 2010/09. Cancer Bioinformatics Whorkshop videolectures.net
Posters
  • • Garcia M, Juhos S, Larsson M, Diaz de Ståhl T, Sandgren S, Eisfeldt J, DiLorenzo S, M Martin, Olason P, Ewels P, Nystedt B, Nistér M, Käller M, Sarek, a workflow for WGS analysis of germline and somatic mutations, Stockholm, Sweden, 2018/08. Department Kick Off 2018
  • • Garcia M, Juhos S, Larsson M, Diaz de Ståhl T, Sandgren S, Eisfeldt J, DiLorenzo S, M Martin, Olason P, Ewels P, Nystedt B, Nistér M, Käller M, Sarek, a workflow for WGS analysis of germline and somatic mutations, Reykjavìk, Iceland, 2018/06. The Nordic Precision Medicine Initiative
  • • Garcia M, Juhos S, Larsson M, Diaz de Ståhl T, Sandgren S, Eisfeldt J, DiLorenzo S, M Martin, Olason P, Ewels P, Nystedt B, Nistér M, Käller M, Sarek, a workflow for WGS analysis of germline and somatic mutations, Stockholm, Sweden, 2018/05. Keystone Symposia - Precision Medicine in Cancer (E1)
  • • Garcia M, Juhos S, Larsson M, Diaz de Ståhl T, Sandgren S, Eisfeldt J, DiLorenzo S, M Martin, Olason P, Ewels P, Nystedt B, Nistér M, Käller M, Sarek, a workflow for WGS analysis of germline and somatic mutations, Stockholm, Sweden, 2018/03. Frontiers in Cancer Research and Therapy 2018
  • • Garcia M, Juhos S, Larsson M, Diaz de Ståhl T, Sandgren S, Eisfeldt J, DiLorenzo S, M Martin, Olason P, Nystedt B, Nistér M, Käller M, Cancer Analysis Workflow to process normal/tumor WGS data, Stockholm, Sweden, 2017/08. Department Kick Off 2017
  • • Garcia M, Juhos S, Larsson M, Diaz de Ståhl T, Sandgren S, Eisfeldt J, DiLorenzo S, M Martin, Olason P, Nystedt B, Nistér M, Käller M, Cancer Analysis Workflow to process normal/tumor WGS data, Copenhagen, Denmark, 2017/05. European Human Genetics Conference 2017
  • • Garcia M, Sahlén P, Diaz de Ståhl T, Eisfeldt J, Juhos S, DiLorenzo S, Larsson M, Olason P, Nystedt B, Nistér M, Käller M, Cancer Analysis Workflow Of Tumor/Normal Pairs At The National Genomics Infrastructure, Stockholm, Sweden, 2017/02. Frontiers in Cancer Research and Therapy 2017
  • • Garcia M, Sahlén P, Diaz de Ståhl T, Eisfeldt J, Juhos S, DiLorenzo S, Larsson M, Olason P, Nystedt B, Nistér M, Käller M, Cancer Analysis Workflow Of Tumor/Normal Pairs At The National Genomics Infrastructure, Djurö, Sweden, 2016/09. The XVth KICancer Retreat 2016
  • • Garcia M, Parent MA, Benoukraf T, Visualizing the DNA/DNA interactome using ChromoLens, Singapore, Singapore, 2013/10. Frontiers in Cancer Science 2013
  • • Garcia M, Millat-Carus R, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Interactome-Transcriptome Integration Uncovers More Stable and Better Performing Biomarkers in Breast Cancer, Basel, Switzerland, 2012/09. ECCB 2012 - F1000
  • • Garcia M, Millat-Carus R, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Interactome-Transcriptome Integration Uncovers More Stable and Better Performing Biomarkers in Breast Cancer, Rennes, France, 2012/07. JOBIM 2012
  • • Garcia M, Millat-Carus R, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Interactome-Transcriptome Integration Uncovers More Stable and Better Performing Biomarkers in Breast Cancer, Marseille, France, 2012/02. 6ème Colloque du Cancéropôle PACA
  • • Garcia M, Stahl O, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Biomarkers Discovery in Breast Cancer by Interactome-Transcriptome Integration, Paris, France, 2011/07. JOBIM 2011
  • • Garcia M, Stahl O, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Biomarkers Discovery in Breast Cancer by Interactome-Transcriptome Integration, Marseille, France, 2011/06. 19th meeting of doctoral school
  • • Garcia M, Stahl O, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Biomarkers Discovery in Breast Cancer by Interactome-Transcriptome Integration, Marseille, France, 2010/12. BCP VII
  • • Garcia M, Stahl O, Finetti P, Birnbaum D, Bertucci F, Bidaut G, Biomarkers Discovery in Breast Cancer by Interactome-Transcriptome Integration, St Raphaël, France, 2010/04. Interactomics: at the crossroads of biology and bioinformatics
Scientific animation workshop
  • • Colette Y, Betzi S, Garcia M, La Chimie - base du Vivant, au service de la Recherche en Cancérologie, Marseille, France, 2011/10. Fête de la Science - Marché de la chimie